Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794132.1_cds_XP_016437086.1_3211
CDS Infomation

[gene=LOC107763148] [db_xref=GeneID:107763148] [protein=pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like] [protein_id=XP_016437086.1] [location=complement(183445..184962)] [gbkey=CDS]
Sequence

ATGTACGGGAAATGTGGTGTTATAAAACTAGCACAGAAACTGTTCGATGAAATGCCTGAG
AGAAACGTGGTGACATGGAATGCTTTGATTTCTGGTTATTTGGACATCCATTACCCTGAA
AATGCTGTTGCAATGTTTCTTGAAATGCTAAGAGAGGGTATTAGTCCAACCCCTTCTAGT
GTTTCAGCTGTTTTAGTTGGTTGTACTCAGTTAGAAGCATGTGAACTTGGGGCTCAGTTG
CATGCTTTGATTTGGAAAGCTGGTTTTGCTTTGAATCTTGTAGTAGATACTGTTTTGATT
GATATGTATTCAAAGTGTCTTGATCTTGAGACTTCGAGGAGAGTTTTCGATCAAATGCCT
GAAAGGAATGTTATTACTTGGACGTCCATGATTACTGGTTATGCCCAAAAGCAATGCCCT
TTCCAGGCTTTGACTTTGTTCAAGGAAATGTTGAAGTTGGGAATTCGACCAAATTATGTT
ACGTACTCTAGTTTGTTGAACTCATTTTCTTGCCCAGATTACTTGGTTCATTGTGAGCAA
GTCCACTGTCATGTAATTCAGCAAGGTTTTAACACTAACCACTACTTGGTGGTAACACTG
TTGTCTGTTTACTCAGAGTGTAGTTGTAGCTTAGAAGATTTTCAAAAGTTGTGCTCTGAC
ACTATGAAATGGGATGAAATCTCTTGGAATGCCGTCATTGCTGGTTTCTCTAATTTAGCA
GTCGGTGGACAAGCCTTCGCATGCTTTGCTAGAATGAGACGGGCGGGCTTTACTGCTGAC
CATTACACTTTTGCAAGCATCTTGAAAGCTATTGGGAACATTTCGGGCCTAGGGGAGGGA
ATGCAGACCCATTGTCTAGCTCTGAAAACAGGATATACTTTCGAAGTTTTCATACAAAAC
GGGCTTCTTTCCATGTATACAAGATGTGGTAGACTTGAAGAAGCGGAGAGAATATTCTCT
TCAATGGAGGAAAGAGACCTCATATCGTGGAACTCGCTTCTTACAGGCTGTGCTCATCAT
GGTTATGGTAGGGATGTGATGGTTATGTTTGAAGAAATGAGGAGATGTGGTATTAAACCA
GATCTAACCACATTCCTCGCTGTACTTTCAGCATGTAGACATGCTGGCCTGCTCGACGAA
GGGATTAAATATTTTGATTTGATGAAGAATGACAATTCCCTACCACCACCAAAGCTAGAG
CATTATGCTTGCATAGTCGACCTTTATGGCCGTGCTGGTCATCTACTTGAAGCAGAGGCC
TTTATTAACAATATGCCAATAGAGCCAGGACCTTCGGTTTTTAAAAGCCTATTAAGTGCT
TGCCAACTTCATGGTAACAAGGAACTTGCCATTATTTCTTCCAAGAAGCTTGTTGAACTT
TGCCCTAACGATCCTGCAACGTACATATTGCTAGCAAATGTGCTAGCATCGGAAGGGAAT
TGGAATGATGCAGAGGGACAGCGCAAGCTTATGTTGGATAGAGGTTTGAGTAAGAAACCT
GGTTATAGCTGGCTATGA

Peptide Sequence

PEP ID

XP_016437086.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like [Nicotiana tabacum]
Sequence

MYGKCGVIKLAQKLFDEMPERNVVTWNALISGYLDIHYPENAVAMFLEMLREGISPTPSS
VSAVLVGCTQLEACELGAQLHALIWKAGFALNLVVDTVLIDMYSKCLDLETSRRVFDQMP
ERNVITWTSMITGYAQKQCPFQALTLFKEMLKLGIRPNYVTYSSLLNSFSCPDYLVHCEQ
VHCHVIQQGFNTNHYLVVTLLSVYSECSCSLEDFQKLCSDTMKWDEISWNAVIAGFSNLA
VGGQAFACFARMRRAGFTADHYTFASILKAIGNISGLGEGMQTHCLALKTGYTFEVFIQN
GLLSMYTRCGRLEEAERIFSSMEERDLISWNSLLTGCAHHGYGRDVMVMFEEMRRCGIKP
DLTTFLAVLSACRHAGLLDEGIKYFDLMKNDNSLPPPKLEHYACIVDLYGRAGHLLEAEA
FINNMPIEPGPSVFKSLLSACQLHGNKELAIISSKKLVELCPNDPATYILLANVLASEGN
WNDAEGQRKLMLDRGLSKKPGYSWL

Transcript Sequence

Gene sequence data has not been registered.